diff --git a/kotlin-native/backend.native/compiler/ir/backend.native/src/org/jetbrains/kotlin/backend/konan/Fir2Ir.kt b/kotlin-native/backend.native/compiler/ir/backend.native/src/org/jetbrains/kotlin/backend/konan/Fir2Ir.kt
index f23f45121bf..7558e76d538 100644
--- a/kotlin-native/backend.native/compiler/ir/backend.native/src/org/jetbrains/kotlin/backend/konan/Fir2Ir.kt
+++ b/kotlin-native/backend.native/compiler/ir/backend.native/src/org/jetbrains/kotlin/backend/konan/Fir2Ir.kt
@@ -61,7 +61,6 @@ internal fun PhaseContext.fir2Ir(
                 lookupTracker = LookupTracker.DO_NOTHING
         )
         dependencies += moduleDescriptor
-        moduleDescriptor.setDependencies(ArrayList(dependencies))
 
         val isBuiltIns = moduleDescriptor.isNativeStdlib()
         if (isBuiltIns) builtInsModule = moduleDescriptor.builtIns
@@ -69,6 +68,11 @@ internal fun PhaseContext.fir2Ir(
         moduleDescriptor
     }
 
+    librariesDescriptors.forEach { moduleDescriptor ->
+        // Yes, just to all of them.
+        moduleDescriptor.setDependencies(ArrayList(dependencies))
+    }
+
     val fir2irResult = Fir2IrConverter.createModuleFragmentWithSignaturesIfNeeded(
             input.session, input.scopeSession, input.firFiles + commonFirFiles,
             configuration.languageVersionSettings, signaturer,