Revert "Avoid having -d and -module set at the same time"

This reverts commit ac241e267648e9344d718c3a44446c6e13d8d2e4.

libraries/tools/kotlin-gradle-plugin/src/main/kotlin/org/jetbrains/kotlin/compilerRunner/GradleKotlinCompilerRunner.kt

@@ -58,16 +58,17 @@ internal class GradleCompilerRunner(private val project: Project) : KotlinCompil
             args: K2JVMCompilerArguments,
             environment: GradleCompilerEnvironment
     ): ExitCode {
+        val outputDir = args.destinationAsFile
+
         val moduleFile = makeModuleFile(
                 args.moduleName,
                 isTest = false,
-                outputDir = args.destinationAsFile,
+                outputDir = outputDir,
                 sourcesToCompile = sourcesToCompile,
                 javaSourceRoots = javaSourceRoots,
                 classpath = args.classpathAsList,
                 friendDirs = args.friendPaths?.map(::File) ?: emptyList())
         args.module = moduleFile.absolutePath
-        args.destination = null
 
         try {
             return runCompiler(K2JVM_COMPILER, args, environment)