[Build] Migrate most of the build logic from Project.buildDir usage

It's going to be deprecated in Gradle 8.3

There's currently no way to pass a `org.gradle.api.provider.Provider` to the JavaExec.systemProperty or Test.systemProperty. There's a workaround using `org.gradle.process.CommandLineArgumentProvider`, but I intentionally don't rework these calls as Gradle is going to allow passing providers to configure system properties: https://github.com/gradle/gradle/issues/12247#issuecomment-1568427242
^KTI-1473 In Progress

kotlin-native/performance/framework/build.gradle

@@ -1,6 +1,5 @@
 import org.jetbrains.kotlin.MPPTools
 import org.jetbrains.kotlin.PlatformInfo
-import org.jetbrains.kotlin.RunJvmTask
 import org.jetbrains.kotlin.gradle.plugin.mpp.NativeBuildType
 
 buildscript {
@@ -106,7 +105,7 @@ task konanJsonReport {
                                                       'compileTime'    : [nativeCompileTime],
                                                       'codeSize'       : MPPTools.getCodeSizeBenchmark(applicationName, nativeExecutable)]
             def output = MPPTools.createJsonReport(properties)
-            new File("${buildDir.absolutePath}/${nativeJson}").write(output)
+            layout.buildDirectory.file(nativeJson).get().asFile.write(output)
         }
     }
 }