[Analysis API] use createSearchScopeByLibraryRoots for test libraries

As it is more similar to production. Also, fixed scope search for klib.
Now we register main binary modules before to avoid duplication with
libraries from createLibrariesByCompilerConfigurators as now we can
have a declared library and regular sources

^KT-62888
^KT-62651

analysis/analysis-test-framework/tests/org/jetbrains/kotlin/analysis/test/framework/project/structure/KtLibraryBinaryModuleFactory.kt

@@ -1,13 +1,14 @@
 /*
- * Copyright 2010-2023 JetBrains s.r.o. and Kotlin Programming Language contributors.
+ * Copyright 2010-2024 JetBrains s.r.o. and Kotlin Programming Language contributors.
  * Use of this source code is governed by the Apache 2.0 license that can be found in the license/LICENSE.txt file.
  */
 
 package org.jetbrains.kotlin.analysis.test.framework.project.structure
 
 import com.intellij.openapi.project.Project
-import com.intellij.psi.search.GlobalSearchScope
 import org.jetbrains.kotlin.analysis.api.standalone.base.project.structure.KtModuleWithFiles
+import org.jetbrains.kotlin.analysis.api.standalone.base.project.structure.StandaloneProjectFactory
+import org.jetbrains.kotlin.analysis.test.framework.services.environmentManager
 import org.jetbrains.kotlin.analysis.test.framework.services.libraries.compiledLibraryProvider
 import org.jetbrains.kotlin.analysis.test.framework.services.libraries.testModuleDecompiler
 import org.jetbrains.kotlin.test.model.TestModule
@@ -25,12 +26,15 @@ object KtLibraryBinaryModuleFactory : KtModuleFactory {
             KtLibraryModuleImpl(
                 testModule.name,
                 testModule.targetPlatform,
-                GlobalSearchScope.filesScope(project, decompiledFiles.mapTo(mutableSetOf()) { it.virtualFile }),
+                StandaloneProjectFactory.createSearchScopeByLibraryRoots(
+                    listOf(library),
+                    testServices.environmentManager.getProjectEnvironment(),
+                ),
                 project,
                 binaryRoots = listOf(library),
                 librarySources = null,
             ),
-            decompiledFiles
+            decompiledFiles,
         )
     }
 }

analysis/analysis-test-framework/tests/org/jetbrains/kotlin/analysis/test/framework/project/structure/KtLibrarySourceModuleFactory.kt

@@ -1,5 +1,5 @@
 /*
- * Copyright 2010-2023 JetBrains s.r.o. and Kotlin Programming Language contributors.
+ * Copyright 2010-2024 JetBrains s.r.o. and Kotlin Programming Language contributors.
  * Use of this source code is governed by the Apache 2.0 license that can be found in the license/LICENSE.txt file.
  */
 
@@ -9,9 +9,11 @@ import com.intellij.openapi.project.Project
 import com.intellij.psi.search.GlobalSearchScope
 import org.jetbrains.kotlin.analysis.api.impl.base.util.LibraryUtils
 import org.jetbrains.kotlin.analysis.api.standalone.base.project.structure.KtModuleWithFiles
+import org.jetbrains.kotlin.analysis.api.standalone.base.project.structure.StandaloneProjectFactory
+import org.jetbrains.kotlin.analysis.test.framework.services.environmentManager
+import org.jetbrains.kotlin.analysis.test.framework.services.libraries.compiledLibraryProvider
 import org.jetbrains.kotlin.test.model.TestModule
 import org.jetbrains.kotlin.test.services.TestServices
-import org.jetbrains.kotlin.analysis.test.framework.services.libraries.compiledLibraryProvider
 import java.nio.file.Path
 
 /**
@@ -28,15 +30,25 @@ object KtLibrarySourceModuleFactory : KtModuleFactory {
             librarySourcesJar = librarySourcesJar,
             testModule = testModule,
             project = project,
+            testServices = testServices,
         )
     }
 }
 
-fun createKtLibrarySourceModule(libraryJar: Path, librarySourcesJar: Path, testModule: TestModule, project: Project): KtModuleWithFiles {
+fun createKtLibrarySourceModule(
+    libraryJar: Path,
+    librarySourcesJar: Path,
+    testModule: TestModule,
+    project: Project,
+    testServices: TestServices,
+): KtModuleWithFiles {
     val libraryKtModule = KtLibraryModuleImpl(
         testModule.name,
         testModule.targetPlatform,
-        GlobalSearchScope.filesScope(project, LibraryUtils.getAllVirtualFilesFromJar(libraryJar)),
+        StandaloneProjectFactory.createSearchScopeByLibraryRoots(
+            listOf(libraryJar),
+            testServices.environmentManager.getProjectEnvironment(),
+        ),
         project,
         binaryRoots = listOf(libraryJar),
         librarySources = null,

analysis/analysis-test-framework/tests/org/jetbrains/kotlin/analysis/test/framework/project/structure/TestModuleStructureFactory.kt

@@ -1,5 +1,5 @@
 /*
- * Copyright 2010-2023 JetBrains s.r.o. and Kotlin Programming Language contributors.
+ * Copyright 2010-2024 JetBrains s.r.o. and Kotlin Programming Language contributors.
  * Use of this source code is governed by the Apache 2.0 license that can be found in the license/LICENSE.txt file.
  */
 
@@ -58,6 +58,10 @@ object TestModuleStructureFactory {
                     // Not-under-content-root modules have no external dependencies on purpose
                 }
                 is KtModuleWithModifiableDependencies -> {
+                    if (ktModule is KtBinaryModule) {
+                        binaryModulesBySourceRoots.getOrPut(ktModule.getBinaryRoots().toSet()) { ktModule }
+                    }
+
                     addModuleDependencies(testModule, moduleEntriesByName, ktModule)
                     stdlibAndSdkDependencies(ktModule, testModule, project, testServices).forEach { library ->
                         val cachedLibrary = binaryModulesBySourceRoots.getOrPut(library.getBinaryRoots().toSet()) { library }