diff --git a/libraries/kotlin.test/js-ir/build.gradle.kts b/libraries/kotlin.test/js-ir/build.gradle.kts
index f583b1baa92..0ffd46288be 100644
--- a/libraries/kotlin.test/js-ir/build.gradle.kts
+++ b/libraries/kotlin.test/js-ir/build.gradle.kts
@@ -52,6 +52,12 @@ tasks.withType<KotlinCompile<*>>().configureEach {
         "-opt-in=kotlin.ExperimentalMultiplatform",
         "-opt-in=kotlin.contracts.ExperimentalContracts"
     )
+
+    doFirst {
+        kotlinOptions.freeCompilerArgs += listOfNotNull(
+            "-Xklib-relative-path-base=$buildDir".takeIf { !kotlinBuildProperties.getBoolean("kotlin.build.use.absolute.paths.in.klib") }
+        )
+    }
 }
 
 tasks.named("compileKotlinJs") {
diff --git a/libraries/stdlib/js-ir/build.gradle.kts b/libraries/stdlib/js-ir/build.gradle.kts
index f7df4ee0e36..f8412b3517b 100644
--- a/libraries/stdlib/js-ir/build.gradle.kts
+++ b/libraries/stdlib/js-ir/build.gradle.kts
@@ -143,6 +143,12 @@ tasks.withType<KotlinCompile<*>>().configureEach {
         "-opt-in=kotlin.ExperimentalUnsignedTypes",
         "-opt-in=kotlin.ExperimentalStdlibApi"
     )
+
+    doFirst {
+        kotlinOptions.freeCompilerArgs += listOfNotNull(
+            "-Xklib-relative-path-base=$buildDir".takeIf { !kotlinBuildProperties.getBoolean("kotlin.build.use.absolute.paths.in.klib") }
+        )
+    }
 }
 
 val compileKotlinJs by tasks.existing(KotlinCompile::class) {