diff --git a/libraries/.idea/runConfigurations/Regenerate_standard_library_generated_sources.xml b/.idea/runConfigurations/Generate_standard_library_sources.xml
similarity index 70%
rename from libraries/.idea/runConfigurations/Regenerate_standard_library_generated_sources.xml
rename to .idea/runConfigurations/Generate_standard_library_sources.xml
index b32565a4550..768f00fcc09 100644
--- a/libraries/.idea/runConfigurations/Regenerate_standard_library_generated_sources.xml
+++ b/.idea/runConfigurations/Generate_standard_library_sources.xml
@@ -1,8 +1,8 @@
 <component name="ProjectRunConfigurationManager">
-  <configuration default="false" name="Regenerate standard library generated sources" type="GradleRunConfiguration" factoryName="Gradle">
+  <configuration default="false" name="Generate standard library sources" type="GradleRunConfiguration" factoryName="Gradle">
     <ExternalSystemSettings>
       <option name="executionName" />
-      <option name="externalProjectPath" value="$PROJECT_DIR$/tools/kotlin-stdlib-gen" />
+      <option name="externalProjectPath" value="$PROJECT_DIR$/libraries/tools/kotlin-stdlib-gen" />
       <option name="externalSystemIdString" value="GRADLE" />
       <option name="scriptParameters" value="" />
       <option name="taskDescriptions">
diff --git a/libraries/.idea/runConfigurations/Binary_compatibility_tests__overwrite_results.xml b/.idea/runConfigurations/Test__public_API_binary_compatibility_validator__overwrite_results.xml
similarity index 70%
rename from libraries/.idea/runConfigurations/Binary_compatibility_tests__overwrite_results.xml
rename to .idea/runConfigurations/Test__public_API_binary_compatibility_validator__overwrite_results.xml
index 92e5ddd374a..6108c0ebb1c 100644
--- a/libraries/.idea/runConfigurations/Binary_compatibility_tests__overwrite_results.xml
+++ b/.idea/runConfigurations/Test__public_API_binary_compatibility_validator__overwrite_results.xml
@@ -1,8 +1,8 @@
 <component name="ProjectRunConfigurationManager">
-  <configuration default="false" name="Binary compatibility tests, overwrite results" type="GradleRunConfiguration" factoryName="Gradle">
+  <configuration default="false" name="Test: public API binary compatibility validator, overwrite results" type="GradleRunConfiguration" factoryName="Gradle">
     <ExternalSystemSettings>
       <option name="executionName" />
-      <option name="externalProjectPath" value="$PROJECT_DIR$/tools/binary-compatibility-validator" />
+      <option name="externalProjectPath" value="$PROJECT_DIR$/libraries/tools/binary-compatibility-validator" />
       <option name="externalSystemIdString" value="GRADLE" />
       <option name="scriptParameters" value=" --tests * " />
       <option name="taskDescriptions">
@@ -10,6 +10,7 @@
       </option>
       <option name="taskNames">
         <list>
+          <option value=":kotlin-runtime:clean" />
           <option value=":kotlin-stdlib:clean" />
           <option value=":kotlin-reflect:clean" />
           <option value=":tools:binary-compatibility-validator:cleanTest" />
diff --git a/libraries/.idea/vcs.xml b/libraries/.idea/vcs.xml
deleted file mode 100644
index e2edc4f8129..00000000000
--- a/libraries/.idea/vcs.xml
+++ /dev/null
@@ -1,24 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<project version="4">
-  <component name="IssueNavigationConfiguration">
-    <option name="links">
-      <list>
-        <IssueNavigationLink>
-          <option name="issueRegexp" value="[A-Z]+\-\d+" />
-          <option name="linkRegexp" value="http://youtrack.jetbrains.com/issue/$0" />
-        </IssueNavigationLink>
-        <IssueNavigationLink>
-          <option name="issueRegexp" value="EA\-(\d+)" />
-          <option name="linkRegexp" value="http://ea.jetbrains.com/browser/ea_problems/$1" />
-        </IssueNavigationLink>
-        <IssueNavigationLink>
-          <option name="issueRegexp" value="KEEP\-(\d+)" />
-          <option name="linkRegexp" value="https://github.com/Kotlin/KEEP/issues/$1" />
-        </IssueNavigationLink>
-      </list>
-    </option>
-  </component>
-  <component name="VcsDirectoryMappings">
-    <mapping directory="$PROJECT_DIR$/.." vcs="Git" />
-  </component>
-</project>
\ No newline at end of file