Avoid marking dirty dependencies from already compiled chunks

#KT-17397 fixed

jps-plugin/testData/incremental/multiModule/classAdded/build.log

@@ -8,7 +8,6 @@ Compiling files:
   module2/src/A.kt
 End of files
 Marked as dirty by Kotlin:
-  module1/src/A.kt
   module2/src/B.kt
   module2/src/createA.kt
   module2/src/createB.kt
@@ -39,13 +38,7 @@ Unresolved reference: foo
 ================ Step #2 =================
 
 Building module1
-Cleaning output files:
-  out/production/module1/foo/A.class
-End of files
-Compiling files:
-  module1/src/A.kt
-End of files
-Exit code: OK
+Exit code: NOTHING_DONE
 ------------------------------------------
 Building module2
 Cleaning output files:
@@ -60,4 +53,4 @@ Compiling files:
   module2/src/useBbar.kt
 End of files
 Exit code: OK
-------------------------------------------
+------------------------------------------

jps-plugin/testData/incremental/multiModule/classRemoved/build.log

@@ -1,13 +1,7 @@
 ================ Step #1 =================
 
 Building module1
-Cleaning output files:
-  out/production/module1/foo/A.class
-End of files
-Compiling files:
-  module1/src/A.kt
-End of files
-Exit code: OK
+Exit code: NOTHING_DONE
 ------------------------------------------
 Cleaning output files:
   out/production/module2/foo/A.class
@@ -40,23 +34,13 @@ Compiling files:
   module2/src/createA.kt
   module2/src/useAfoo.kt
 End of files
-Marked as dirty by Kotlin:
-  module1/src/A.kt
-Exit code: ADDITIONAL_PASS_REQUIRED
-------------------------------------------
-Exit code: NOTHING_DONE
+Exit code: OK
 ------------------------------------------
 
 ================ Step #3 =================
 
 Building module1
-Cleaning output files:
-  out/production/module1/foo/A.class
-End of files
-Compiling files:
-  module1/src/A.kt
-End of files
-Exit code: OK
+Exit code: NOTHING_DONE
 ------------------------------------------
 Building module2
 Compiling files:
@@ -65,4 +49,4 @@ End of files
 Exit code: ABORT
 ------------------------------------------
 COMPILATION FAILED
-Expecting a top level declaration
+Expecting a top level declaration

jps-plugin/testData/incremental/multiModule/moveFileToAnotherModule/build.log

@@ -25,9 +25,5 @@ Compiling files:
   module2/src/useClassB.kt
   module2/src/useFunB.kt
 End of files
-Marked as dirty by Kotlin:
-  module1/src/b.kt
-Exit code: ADDITIONAL_PASS_REQUIRED
-------------------------------------------
-Exit code: NOTHING_DONE
-------------------------------------------
+Exit code: OK
+------------------------------------------