diff --git a/compiler/frontend/src/org/jetbrains/kotlin/psi/stubs/elements/JetFileElementType.java b/compiler/frontend/src/org/jetbrains/kotlin/psi/stubs/elements/JetFileElementType.java
index 2b17bda0ca6..e7f7677b1ae 100644
--- a/compiler/frontend/src/org/jetbrains/kotlin/psi/stubs/elements/JetFileElementType.java
+++ b/compiler/frontend/src/org/jetbrains/kotlin/psi/stubs/elements/JetFileElementType.java
@@ -36,7 +36,7 @@ import org.jetbrains.kotlin.psi.stubs.impl.KotlinFileStubImpl;
 import java.io.IOException;
 
 public class JetFileElementType extends IStubFileElementType<KotlinFileStub> {
-    public static final int STUB_VERSION = 44;
+    public static final int STUB_VERSION = 45;
 
     private static final String NAME = "kotlin.FILE";
 
diff --git a/idea/idea-analysis/src/org/jetbrains/kotlin/idea/decompiler/stubBuilder/TypeClsStubBuilder.kt b/idea/idea-analysis/src/org/jetbrains/kotlin/idea/decompiler/stubBuilder/TypeClsStubBuilder.kt
index 937ec5a4856..ca3992b097a 100644
--- a/idea/idea-analysis/src/org/jetbrains/kotlin/idea/decompiler/stubBuilder/TypeClsStubBuilder.kt
+++ b/idea/idea-analysis/src/org/jetbrains/kotlin/idea/decompiler/stubBuilder/TypeClsStubBuilder.kt
@@ -21,6 +21,7 @@ import com.intellij.psi.stubs.StubElement
 import org.jetbrains.kotlin.builtins.KotlinBuiltIns
 import org.jetbrains.kotlin.lexer.JetModifierKeywordToken
 import org.jetbrains.kotlin.lexer.JetTokens
+import org.jetbrains.kotlin.load.java.JvmAnnotationNames
 import org.jetbrains.kotlin.name.ClassId
 import org.jetbrains.kotlin.name.FqName
 import org.jetbrains.kotlin.name.Name
@@ -43,7 +44,10 @@ class TypeClsStubBuilder(private val c: ClsStubBuilderContext) {
     fun createTypeReferenceStub(parent: StubElement<out PsiElement>, typeProto: Type) {
         val typeReference = KotlinPlaceHolderStubImpl<JetTypeReference>(parent, JetStubElementTypes.TYPE_REFERENCE)
 
-        val typeAnnotations = c.components.annotationLoader.loadTypeAnnotations(typeProto, c.nameResolver)
+        val typeAnnotations = c.components.annotationLoader.loadTypeAnnotations(typeProto, c.nameResolver).filterNot {
+            val isTopLevelClass = !it.isNestedClass()
+            isTopLevelClass && it.asSingleFqName() in JvmAnnotationNames.ANNOTATIONS_COPIED_TO_TYPES
+        }
         if (typeAnnotations.isNotEmpty()) {
             createAnnotationStubs(typeAnnotations, typeReference, needWrappingAnnotationEntries = true)
         }
diff --git a/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/AnnotatedFlexibleTypes.kt b/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/AnnotatedFlexibleTypes.kt
new file mode 100644
index 00000000000..d29f2c788ee
--- /dev/null
+++ b/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/AnnotatedFlexibleTypes.kt
@@ -0,0 +1,7 @@
+package test
+
+public class AnnotatedFlexibleTypes(val javaClass: d.JavaClass) {
+    fun foo() = javaClass.foo()
+
+    val bar = javaClass.bar()
+}
\ No newline at end of file
diff --git a/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/AnnotatedFlexibleTypes.txt b/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/AnnotatedFlexibleTypes.txt
new file mode 100644
index 00000000000..9a9bb2d3a61
--- /dev/null
+++ b/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/AnnotatedFlexibleTypes.txt
@@ -0,0 +1,44 @@
+PsiJetFileStubImpl[package=test]
+  PACKAGE_DIRECTIVE:
+    REFERENCE_EXPRESSION:[referencedName=test]
+  CLASS:[fqName=test.AnnotatedFlexibleTypes, isEnumEntry=false, isInterface=false, isLocal=false, isTopLevel=true, name=AnnotatedFlexibleTypes, superNames=[]]
+    MODIFIER_LIST:[public final]
+    PRIMARY_CONSTRUCTOR:
+      MODIFIER_LIST:[public]
+      VALUE_PARAMETER_LIST:
+        VALUE_PARAMETER:[fqName=null, hasDefaultValue=false, hasValOrVarNode=false, isMutable=false, name=javaClass]
+          TYPE_REFERENCE:
+            USER_TYPE:[isAbsoluteInRootPackage=false]
+              USER_TYPE:[isAbsoluteInRootPackage=false]
+                REFERENCE_EXPRESSION:[referencedName=d]
+              REFERENCE_EXPRESSION:[referencedName=JavaClass]
+    CLASS_BODY:
+      PROPERTY:[fqName=test.AnnotatedFlexibleTypes.bar, hasDelegate=false, hasDelegateExpression=false, hasInitializer=false, hasReturnTypeRef=true, isExtension=false, isTopLevel=false, isVar=false, name=bar]
+        MODIFIER_LIST:[internal final]
+        TYPE_REFERENCE:
+          USER_TYPE:[isAbsoluteInRootPackage=false]
+            USER_TYPE:[isAbsoluteInRootPackage=false]
+              REFERENCE_EXPRESSION:[referencedName=kotlin]
+            REFERENCE_EXPRESSION:[referencedName=MutableCollection]
+            TYPE_ARGUMENT_LIST:
+              TYPE_PROJECTION:[projectionKind=NONE]
+                TYPE_REFERENCE:
+                  USER_TYPE:[isAbsoluteInRootPackage=false]
+                    USER_TYPE:[isAbsoluteInRootPackage=false]
+                      REFERENCE_EXPRESSION:[referencedName=kotlin]
+                    REFERENCE_EXPRESSION:[referencedName=Int]
+      PROPERTY:[fqName=test.AnnotatedFlexibleTypes.javaClass, hasDelegate=false, hasDelegateExpression=false, hasInitializer=false, hasReturnTypeRef=true, isExtension=false, isTopLevel=false, isVar=false, name=javaClass]
+        MODIFIER_LIST:[internal final]
+        TYPE_REFERENCE:
+          USER_TYPE:[isAbsoluteInRootPackage=false]
+            USER_TYPE:[isAbsoluteInRootPackage=false]
+              REFERENCE_EXPRESSION:[referencedName=d]
+            REFERENCE_EXPRESSION:[referencedName=JavaClass]
+      FUN:[fqName=test.AnnotatedFlexibleTypes.foo, hasBlockBody=true, hasBody=true, hasTypeParameterListBeforeFunctionName=false, isExtension=false, isTopLevel=false, name=foo]
+        MODIFIER_LIST:[internal final]
+        VALUE_PARAMETER_LIST:
+        TYPE_REFERENCE:
+          USER_TYPE:[isAbsoluteInRootPackage=false]
+            USER_TYPE:[isAbsoluteInRootPackage=false]
+              REFERENCE_EXPRESSION:[referencedName=kotlin]
+            REFERENCE_EXPRESSION:[referencedName=Int]
diff --git a/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/d/JavaClass.java b/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/d/JavaClass.java
new file mode 100644
index 00000000000..1586d2b060f
--- /dev/null
+++ b/idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/d/JavaClass.java
@@ -0,0 +1,13 @@
+package d
+
+import org.jetbrains.annotations.*;
+
+public abstract class JavaClass {
+    @NotNull
+    @Nullable
+    public abstract Integer foo();
+
+    @Mutable
+    @ReadOnly
+    public abstract java.util.Collection<Integer> bar();
+}
\ No newline at end of file
diff --git a/idea/tests/org/jetbrains/kotlin/idea/decompiler/stubBuilder/ClsStubBuilderTestGenerated.java b/idea/tests/org/jetbrains/kotlin/idea/decompiler/stubBuilder/ClsStubBuilderTestGenerated.java
index 736c38bbb49..269eb227ffb 100644
--- a/idea/tests/org/jetbrains/kotlin/idea/decompiler/stubBuilder/ClsStubBuilderTestGenerated.java
+++ b/idea/tests/org/jetbrains/kotlin/idea/decompiler/stubBuilder/ClsStubBuilderTestGenerated.java
@@ -35,6 +35,12 @@ public class ClsStubBuilderTestGenerated extends AbstractClsStubBuilderTest {
         JetTestUtils.assertAllTestsPresentByMetadata(this.getClass(), new File("idea/testData/decompiler/stubBuilder"), Pattern.compile("^([^\\.]+)$"), false);
     }
 
+    @TestMetadata("AnnotatedFlexibleTypes")
+    public void testAnnotatedFlexibleTypes() throws Exception {
+        String fileName = JetTestUtils.navigationMetadata("idea/testData/decompiler/stubBuilder/AnnotatedFlexibleTypes/");
+        doTest(fileName);
+    }
+
     @TestMetadata("AnnotationClass")
     public void testAnnotationClass() throws Exception {
         String fileName = JetTestUtils.navigationMetadata("idea/testData/decompiler/stubBuilder/AnnotationClass/");