[Build] Fix configuration cache issues (part 1)

* Make `clean` task compatible with configuration cache
* Make Java compile instrumentation compatible with configuration cache
* Make settings.gradle compatible with configuration cache
* Initial work on making IntelliJInstrumentCodeTask compatible with configuration cache
* Make writeStdlibVersion task compatible with configuration cache
* Copy some properties to not capture it's owning object into lambda to support configuration cache

Relates to #KT-44611

prepare/compiler-embeddable/build.gradle.kts

@@ -42,7 +42,7 @@ noDefaultJar()
 
 // dummy is used for rewriting dependencies to the shaded packages in the embeddable compiler
 compilerDummyJar(compilerDummyForDependenciesRewriting("compilerDummy") {
-    classifier = "dummy"
+    archiveClassifier.set("dummy")
 })
 
 class CoreXmlShadingTransformer : Transformer {