[Build] Fix configuration cache issues (part 1)

* Make `clean` task compatible with configuration cache
* Make Java compile instrumentation compatible with configuration cache
* Make settings.gradle compatible with configuration cache
* Initial work on making IntelliJInstrumentCodeTask compatible with configuration cache
* Make writeStdlibVersion task compatible with configuration cache
* Copy some properties to not capture it's owning object into lambda to support configuration cache

Relates to #KT-44611

libraries/commonConfiguration.gradle

@@ -61,10 +61,11 @@ ext.compileJava9Sources = { Project project, String moduleName, Collection<FileC
         it.options.fork = true
         it.options.forkOptions.javaHome = file(JDK_9)
         it.options.sourcepath = files(java9SourceSet.srcDirs)
+        def compileClasspath = project.configurations.java9CompileClasspath
 
         doFirst {
             def moduleFiles = files(*moduleOutputs)
-            def modulePath = project.configurations.java9CompileClasspath.filter { !(it in moduleFiles.files) }
+            def modulePath = compileClasspath.filter { !(it in moduleFiles.files) }
 
             options.compilerArgs = [
                     '--module-path', modulePath.asPath,