diff --git a/compiler/tests/org/jetbrains/kotlin/codegen/BlackBoxCodegenTestGenerated.java b/compiler/tests/org/jetbrains/kotlin/codegen/BlackBoxCodegenTestGenerated.java
index 233649a049e..a23022f11a9 100644
--- a/compiler/tests/org/jetbrains/kotlin/codegen/BlackBoxCodegenTestGenerated.java
+++ b/compiler/tests/org/jetbrains/kotlin/codegen/BlackBoxCodegenTestGenerated.java
@@ -16946,7 +16946,7 @@ public class BlackBoxCodegenTestGenerated extends AbstractBlackBoxCodegenTest {
             }
 
             public void testAllFilesPresentInMultiModule() throws Exception {
-                KotlinTestUtils.assertAllTestsPresentByMetadata(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), TargetBackend.JVM, true);
+                KotlinTestUtils.assertAllTestsPresentByMetadataWithExcluded(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), null, TargetBackend.JVM, true);
             }
 
             @TestMetadata("expectActualLink.kt")
diff --git a/compiler/tests/org/jetbrains/kotlin/codegen/LightAnalysisModeTestGenerated.java b/compiler/tests/org/jetbrains/kotlin/codegen/LightAnalysisModeTestGenerated.java
index e61f18c1350..724b220c2e2 100644
--- a/compiler/tests/org/jetbrains/kotlin/codegen/LightAnalysisModeTestGenerated.java
+++ b/compiler/tests/org/jetbrains/kotlin/codegen/LightAnalysisModeTestGenerated.java
@@ -16941,27 +16941,27 @@ public class LightAnalysisModeTestGenerated extends AbstractLightAnalysisModeTes
         @TestDataPath("$PROJECT_ROOT")
         @RunWith(JUnit3RunnerWithInners.class)
         public static class MultiModule extends AbstractLightAnalysisModeTest {
-            @TestMetadata("expectActualLink.kt")
-            public void ignoreExpectActualLink() throws Exception {
-                runTest("compiler/testData/codegen/box/multiplatform/multiModule/expectActualLink.kt");
-            }
-
-            @TestMetadata("expectActualMemberLink.kt")
-            public void ignoreExpectActualMemberLink() throws Exception {
-                runTest("compiler/testData/codegen/box/multiplatform/multiModule/expectActualMemberLink.kt");
-            }
-
-            @TestMetadata("expectActualTypealiasLink.kt")
-            public void ignoreExpectActualTypealiasLink() throws Exception {
-                runTest("compiler/testData/codegen/box/multiplatform/multiModule/expectActualTypealiasLink.kt");
-            }
-
             private void runTest(String testDataFilePath) throws Exception {
                 KotlinTestUtils.runTest(this::doTest, TargetBackend.JVM, testDataFilePath);
             }
 
             public void testAllFilesPresentInMultiModule() throws Exception {
-                KotlinTestUtils.assertAllTestsPresentByMetadata(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), TargetBackend.JVM, true);
+                KotlinTestUtils.assertAllTestsPresentByMetadataWithExcluded(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), null, TargetBackend.JVM, true);
+            }
+
+            @TestMetadata("expectActualLink.kt")
+            public void testExpectActualLink() throws Exception {
+                runTest("compiler/testData/codegen/box/multiplatform/multiModule/expectActualLink.kt");
+            }
+
+            @TestMetadata("expectActualMemberLink.kt")
+            public void testExpectActualMemberLink() throws Exception {
+                runTest("compiler/testData/codegen/box/multiplatform/multiModule/expectActualMemberLink.kt");
+            }
+
+            @TestMetadata("expectActualTypealiasLink.kt")
+            public void testExpectActualTypealiasLink() throws Exception {
+                runTest("compiler/testData/codegen/box/multiplatform/multiModule/expectActualTypealiasLink.kt");
             }
         }
     }
diff --git a/compiler/tests/org/jetbrains/kotlin/codegen/ir/FirBlackBoxCodegenTestGenerated.java b/compiler/tests/org/jetbrains/kotlin/codegen/ir/FirBlackBoxCodegenTestGenerated.java
index 4ee9fe68921..c823426a46c 100644
--- a/compiler/tests/org/jetbrains/kotlin/codegen/ir/FirBlackBoxCodegenTestGenerated.java
+++ b/compiler/tests/org/jetbrains/kotlin/codegen/ir/FirBlackBoxCodegenTestGenerated.java
@@ -15796,7 +15796,7 @@ public class FirBlackBoxCodegenTestGenerated extends AbstractFirBlackBoxCodegenT
             }
 
             public void testAllFilesPresentInMultiModule() throws Exception {
-                KotlinTestUtils.assertAllTestsPresentByMetadata(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), TargetBackend.JVM_IR, true);
+                KotlinTestUtils.assertAllTestsPresentByMetadataWithExcluded(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), null, TargetBackend.JVM_IR, true);
             }
 
             @TestMetadata("expectActualLink.kt")
diff --git a/compiler/tests/org/jetbrains/kotlin/codegen/ir/IrBlackBoxCodegenTestGenerated.java b/compiler/tests/org/jetbrains/kotlin/codegen/ir/IrBlackBoxCodegenTestGenerated.java
index a94b23811ac..a75f642fbf8 100644
--- a/compiler/tests/org/jetbrains/kotlin/codegen/ir/IrBlackBoxCodegenTestGenerated.java
+++ b/compiler/tests/org/jetbrains/kotlin/codegen/ir/IrBlackBoxCodegenTestGenerated.java
@@ -15796,7 +15796,7 @@ public class IrBlackBoxCodegenTestGenerated extends AbstractIrBlackBoxCodegenTes
             }
 
             public void testAllFilesPresentInMultiModule() throws Exception {
-                KotlinTestUtils.assertAllTestsPresentByMetadata(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), TargetBackend.JVM_IR, true);
+                KotlinTestUtils.assertAllTestsPresentByMetadataWithExcluded(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), null, TargetBackend.JVM_IR, true);
             }
 
             @TestMetadata("expectActualLink.kt")
diff --git a/js/js.tests/test/org/jetbrains/kotlin/js/test/ir/semantics/IrJsCodegenBoxTestGenerated.java b/js/js.tests/test/org/jetbrains/kotlin/js/test/ir/semantics/IrJsCodegenBoxTestGenerated.java
index aead34dab57..510e0b1cfa9 100644
--- a/js/js.tests/test/org/jetbrains/kotlin/js/test/ir/semantics/IrJsCodegenBoxTestGenerated.java
+++ b/js/js.tests/test/org/jetbrains/kotlin/js/test/ir/semantics/IrJsCodegenBoxTestGenerated.java
@@ -12921,7 +12921,7 @@ public class IrJsCodegenBoxTestGenerated extends AbstractIrJsCodegenBoxTest {
             }
 
             public void testAllFilesPresentInMultiModule() throws Exception {
-                KotlinTestUtils.assertAllTestsPresentByMetadata(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), TargetBackend.JS_IR, true);
+                KotlinTestUtils.assertAllTestsPresentByMetadataWithExcluded(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), null, TargetBackend.JS_IR, true);
             }
 
             @TestMetadata("expectActualLink.kt")
diff --git a/js/js.tests/test/org/jetbrains/kotlin/js/test/semantics/JsCodegenBoxTestGenerated.java b/js/js.tests/test/org/jetbrains/kotlin/js/test/semantics/JsCodegenBoxTestGenerated.java
index 1c0da14f0da..03738ad9638 100644
--- a/js/js.tests/test/org/jetbrains/kotlin/js/test/semantics/JsCodegenBoxTestGenerated.java
+++ b/js/js.tests/test/org/jetbrains/kotlin/js/test/semantics/JsCodegenBoxTestGenerated.java
@@ -14061,7 +14061,7 @@ public class JsCodegenBoxTestGenerated extends AbstractJsCodegenBoxTest {
             }
 
             public void testAllFilesPresentInMultiModule() throws Exception {
-                KotlinTestUtils.assertAllTestsPresentByMetadata(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), TargetBackend.JS, true);
+                KotlinTestUtils.assertAllTestsPresentByMetadataWithExcluded(this.getClass(), new File("compiler/testData/codegen/box/multiplatform/multiModule"), Pattern.compile("^(.+)\\.kt$"), null, TargetBackend.JS, true);
             }
 
             @TestMetadata("expectActualLink.kt")
diff --git a/libraries/tools/new-project-wizard/new-project-wizard-cli/tests/org/jetbrains/kotlin/tools/projectWizard/cli/BuildFileGenerationTestGenerated.java b/libraries/tools/new-project-wizard/new-project-wizard-cli/tests/org/jetbrains/kotlin/tools/projectWizard/cli/BuildFileGenerationTestGenerated.java
index fd5cbb0c7b7..8f924d08b42 100644
--- a/libraries/tools/new-project-wizard/new-project-wizard-cli/tests/org/jetbrains/kotlin/tools/projectWizard/cli/BuildFileGenerationTestGenerated.java
+++ b/libraries/tools/new-project-wizard/new-project-wizard-cli/tests/org/jetbrains/kotlin/tools/projectWizard/cli/BuildFileGenerationTestGenerated.java
@@ -25,7 +25,7 @@ public class BuildFileGenerationTestGenerated extends AbstractBuildFileGeneratio
     }
 
     public void testAllFilesPresentInBuildFileGeneration() throws Exception {
-        KotlinTestUtils.assertAllTestsPresentByMetadata(this.getClass(), new File("libraries/tools/new-project-wizard/new-project-wizard-cli/testData/buildFileGeneration"), Pattern.compile("^([^\\.]+)$"), false);
+        KotlinTestUtils.assertAllTestsPresentByMetadataWithExcluded(this.getClass(), new File("libraries/tools/new-project-wizard/new-project-wizard-cli/testData/buildFileGeneration"), Pattern.compile("^([^\\.]+)$"), null, false);
     }
 
     @TestMetadata("android")