merge all into single repo

2020-04-06 20:40:32 +02:00
parent 9dcdb6aafc
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-# Code of FixMiner
-
-Reference: [FixMiner: Mining Relevant Fix Patterns for Automated Program Repair](http://arxiv.org/pdf/1810.01791) (Empirical Software Engineering, [doi:10.1007/s10664-019-09780-z](https://doi.org/10.1007/s10664-019-09780-z))
-
-## Prerequisites
-
-redis should be installed on the machine.
-
-## Build
-
-Clone and install `edu.lu.uni:simple-utils`.
-
-```
-git clone https://github.com/SerVal-DTF/simple-utils
-cd simple-utils
-mvn install
-```
-
-Clone and install the modified version of Gumtree.
-
-```
-git clone https://github.com/SerVal-DTF/gumtree
-cd gumtree
-mvn install
-```
-
-Clone and install fixminer.
-
-```
-git clone https://github.com/SerVal-DTF/fixminer_source
-cd fixminer_source
-mvn install
-```
-
-## Main classes
-
-* `src/main/java/edu/lu/uni/serval/fixminer/Launcher.java` computes the edit scripts from local file pairs and pushes them to a Redis database: 
-  * first run `redis-server`
-  * edit `app.properties` in particular `portInner`, `portDumps`, `inputPath`
-  * `mvn exec:java -Dexec.mainClass=edu.lu.uni.serval.fixminer.Launcher -Dexec.args="../fixminer-core/python/data/app.properties RICHEDITSCRIPT dummy"`
-* `src/main/java/edu/lu/uni/serval/utils/ClusterToPattern.java` extracts the Rich Edit Script from the Gumtree output from the database
-* `src/main/java/edu/lu/uni/serval/utils/CallShell.java`
-* `src/main/java/edu/lu/uni/serval/fixminer/TestTreeLoader.java`
-* `src/main/java/edu/lu/uni/serval/fixminer/jobs/PatternExtractor.java`
-* `src/main/java/edu/lu/uni/serval/fixminer/akka/compare/CompareTrees.java`
-
+# GumTree ![Build Status](https://travis-ci.org/GumTreeDiff/gumtree.svg?branch=master) [![Coverage Status](https://coveralls.io/repos/GumTreeDiff/gumtree/badge.svg?branch=master)](https://coveralls.io/r/GumTreeDiff/gumtree?branch=master)
+
+GumTree is a complete framework to deal with source code as trees and compute differences between them. It includes possibilities such as:
+* converting a source file into a language-agnostic tree format
+* export the produced trees in various formats
+* compute the differences between the trees
+* export these differences in various formats
+* visualize these differences graphically
+
+Compared to classical code differencing tools, it has two important particularities:
+* it works on a tree structure rather than a text structure,
+* it can detect moved or renamed elements in addition of deleted and inserted elements.
+
+We already deal with a wide range of languages: Java, C, JavaScript and Ruby. More languages are coming soon, if you want to help contact [me](www.labri.fr/perso/falleri).
+
+## Citing GumTree
+
+We are researchers, therefore if you use GumTree in an academic work we would be really glad if you cite our seminal paper using the following bibtex:
+
+```
+@inproceedings{DBLP:conf/kbse/FalleriMBMM14,
+  author    = {Jean{-}R{\'{e}}my Falleri and
+               Flor{\'{e}}al Morandat and
+               Xavier Blanc and
+               Matias Martinez and
+               Martin Monperrus},
+  title     = {Fine-grained and accurate source code differencing},
+  booktitle = {{ACM/IEEE} International Conference on Automated Software Engineering,
+               {ASE} '14, Vasteras, Sweden - September 15 - 19, 2014},
+  pages     = {313--324},
+  year      = {2014},
+  url       = {http://doi.acm.org/10.1145/2642937.2642982},
+  doi       = {10.1145/2642937.2642982}
+}
+```
+
+## Documentation
+
+Please consult our [wiki](https://github.com/GumTreeDiff/gumtree/wiki)
+